# CALCULATE PATIENT STATE ALGORITHM STATE = c("WALK", "UP", "DOWN", "SIT") size_ <- 7 differ_ <- 0.1 POINTS <- data.frame( index = integer(1) ) POINTS["state"] <- 0 POINTS["probability"] <- 0 for(i in 1:size_){ POINTS[LETTERS[i]] <- 0 } for(i in size_:(nrow(DATA)-size_)){ start <- DATA[i,]$Head.y end <- DATA[i+size_,]$Head.y state_ <- NULL if(((start - end) < differ_) && (start - end) > -differ_){ if(start >= mean(DATA$Head.y)){ #WALK (4) state_ <- 1 } else{ #SIT (4) state_ <- 4 } } else if((start - end) < differ_) { #UP (2) state_ <- 2 } else if((start - end) > differ_) { #UP (3) state_ <- 3 } else { state_ <- 1 } for(j in 0:size_-1){ POINTS[i-j,LETTERS[j+1]] <- state_ #POINTS[i,LETTERS[j+1]] <- state_ } POINTS[i,]$index <- DATA[i,]$Time if(i>size_*2 && i<=((nrow(DATA) - size_))){ tmp_ <- ( tbl_df( table( POINTS[i-size_,] %>% unlist(., use.names=FALSE) ) ) %>% arrange( desc(n) ) ) POINTS[i-size_,]$state <- tmp_[1,]$Var1 POINTS[i-size_,]$probability <- ((1 / size_) * tmp_[1,]$n) } DATA[i,]$state = state_ print(i) } print("STATE DONE") remove(tmp_) DATA <- DATA[complete.cases(DATA),] rownames(DATA) <- 1:nrow(DATA)